phylogeny
the evolutionary history of a species or group of related species
systematics
a discipline focused on classifying organisms and determining their evolutionary relationships
taxonomy
how organisms are named and classified by their characteristics
binomial nomenclature
classification system in which each species is assigned a two-part scientific name
taxonomic groups
domain kingdom phylum class order family genus species
taxon
a taxonomic unit at any level of hierarchy
phylogenetic tree
a branching diagram that represents the evolutionary history of a group of organisms
Phylocode
a classification system which recognizes only groups that include a common ancestor and all its descendants
branch point
represents the divergence of two evolutionary lineages from a common ancestor
sister taxa
groups of organisms that share an immediate common ancestor
rooted
phylogenetic tree that includes a branch to represent the last common ancestor of all taxa in the tree
basal taxon
a lineage that diverges early in the history of a group
polytomy
a branch from which more than two groups emerge
homologies
phenotypic and genetic similarities due to shared ancestry
analogies
similarities due to convergent evolution
homoplasies
analogous structures or molecular sequences that evolved independently
molecular systematics
discipline that uses DNA and other molecular data to determine evolutionary relationships
cladistics
the approach to systematics in which common ancestry is the primary criterion used to classify organisms
clade
a monophyletic group of species that includes an ancestral species and all its descendants
paraphyletic
a non-clade group which consists of an ancestral species and some of its descendants
polyphyletic
a non-clade group in which some members have different ancestors
shared ancestral
a character that originated in an ancestor of the taxon
shared derived
a character that is an evolutionary novelty unique to a particular clade
outgroup
a species from an evolutionary lineage that is known to have diverged before the species we are studying
maximum parsimony
assumes that the tree that requires the fewest evolutionary events (simplest) is the most likely
maximum likelihood
given certain probability rules about how DNA sequences change over time, a tree can be found that reflects the most likely sequence of evolutionary events
molecular clock
the concept that some genes evolve at constant rates, and which is used to estimate the absolute time of evolutionary change
neutral theory
states that much evolutionary change in genes and proteins has no effect on fitness and therefore is not influenced by Darwinian selection
horizontal gene transfer
the movement of genes from one genome to another via transposable elements, plasmids, viruses, and fusion of organisms